CDS

Accession Number TCMCG051C43357
gbkey CDS
Protein Id XP_024443065.1
Location join(3413191..3413298,3413444..3413548,3413648..3413760,3413868..3413937,3414547..3414624,3415026..3415142,3415233..3415327,3415466..3415545,3415656..3415715,3415842..3415969)
Gene LOC7484003
GeneID 7484003
Organism Populus trichocarpa

Protein

Length 317aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024587297.1
Definition protein LST8 homolog isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Protein LST8 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K08266        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04136        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
ko04151        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
map04136        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
map04151        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
GOs GO:0001932        [VIEW IN EMBL-EBI]
GO:0001934        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005776        [VIEW IN EMBL-EBI]
GO:0006935        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007190        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010562        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030100        [VIEW IN EMBL-EBI]
GO:0030587        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030838        [VIEW IN EMBL-EBI]
GO:0031152        [VIEW IN EMBL-EBI]
GO:0031252        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031929        [VIEW IN EMBL-EBI]
GO:0031931        [VIEW IN EMBL-EBI]
GO:0031932        [VIEW IN EMBL-EBI]
GO:0032147        [VIEW IN EMBL-EBI]
GO:0032148        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032273        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033674        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0038201        [VIEW IN EMBL-EBI]
GO:0040011        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042327        [VIEW IN EMBL-EBI]
GO:0042330        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043327        [VIEW IN EMBL-EBI]
GO:0043519        [VIEW IN EMBL-EBI]
GO:0043520        [VIEW IN EMBL-EBI]
GO:0043549        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0045806        [VIEW IN EMBL-EBI]
GO:0045859        [VIEW IN EMBL-EBI]
GO:0045860        [VIEW IN EMBL-EBI]
GO:0045937        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050764        [VIEW IN EMBL-EBI]
GO:0050765        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051051        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0051703        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090702        [VIEW IN EMBL-EBI]
GO:0098630        [VIEW IN EMBL-EBI]
GO:0098743        [VIEW IN EMBL-EBI]
GO:0099120        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACACAGCCATCAGTAATACTTGCCACTGCTAGTTATGATCACACTATCAGATTTTGGGAGGCAAAAAGTGGCCGCTGTTACCGTACAATCCAATACCCCGATTCGAAGCAAGTTAATAGGCTTGAGATAACCCCTGATAAGAGATACTTGGCCGCAGCCGGGAATCCACACATTAAGCTGTTTGATGTCAACTCAAATAGTCCTCATCCGGTAATGAGCTATGACTCGCATACGGCAAATGTTATGGCTGTGGGATTTCAGTGTGATGGAAACTGGATGTACTCAGGGTCTGAGGATGGAACAGTGAAAATTTGGGATTTGAGGGCCCCTGGTTGTCAAAGGGAATATGAAAGTCGTGCGGCCGTCAACACTGTGGTGTTGCACCCAAACCAGACAGAGCTGATATCTGGAGACCAAAATGGGAACATTCGAGTATGGGATTTGACTGCAAATTCATGCAGTTGTGAATTGGTACCCGAGGTGGATACAGCTGTAAGGTCTCTAACAGTTATGTGGGATGGAAGCTTGGTAGTTGCTGCAAATAACCATGGAACATGTTATGTTTGGCGCTTGTTGCGAGGGAACCAGACAATGACCAACTTTGAGCCACTTCATAAGCTACAAGCACATAATAAATACATTCTCAAATGTCTTCTCTCACCTGAATTTTGTGATCCACACAGATATCTGGCCACTGCATCAGCCGATCACACTGTAAAGATATGGAATGTTGATGGTTTTACTTTAGAGAAAACTTTGATAGGTCACCAACGCTGGGTGTGGGACTGTGTTTTCTCTGTAGATGGTGCATACCTTATAACAGCTTCTTCTGATACGACAGCTAGACTTTGGTCCATGTCATCCGGTGAAGACATCAGGGTGTATCAAGGGCATCACAAGGCGACTGTTTGTTGTGCACTCCATGATGGAGCAGAACCCTCTTCAAGTTGA
Protein:  
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSKQVNRLEITPDKRYLAAAGNPHIKLFDVNSNSPHPVMSYDSHTANVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLLRGNQTMTNFEPLHKLQAHNKYILKCLLSPEFCDPHRYLATASADHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSSGEDIRVYQGHHKATVCCALHDGAEPSSS